[ase-users] Help (Badly needed)

[Glen Jenness]

Looks like your file cntnegxay.xyz doesn't exist.  Are you sure it's in
your directory?

If it is, can you send the file to the list?

On Fri, Feb 22, 2013 at 12:20 PM, Ibrahim (Ibrahim Awad) Awad <
ieawad at crimson.ua.edu> wrote:

> when i type ag filename.xyz, I have this message
>
> Traceback (most recent call last):
>   File "/usr/lib/python2.7/dist-packages/ase/gui/ag.py", line 125, in main
>     run(opt, args)
>   File "/usr/lib/python2.7/dist-packages/ase/gui/ag.py", line 88, in run
>     images.read(args, string2index(opt.image_number))
>   File "/usr/lib/python2.7/dist-packages/ase/gui/images.py", line 157, in
> read
>     i = read(filename, index,filetype)
>   File "/usr/lib/python2.7/dist-packages/ase/io/__init__.py", line 87, in
> read
>     format = filetype(filename)
>   File "/usr/lib/python2.7/dist-packages/ase/io/__init__.py", line 485, in
> filetype
>     fileobj = open(filename)
> IOError: [Errno 2] No such file or directory: 'cntnegxay.xyz'
>
> what's the problem?
>
> An exception occurred!  Please report the issue to
> ase-developers at listserv.fysik.dtu.dk - thanks!  Please also report this if
> it was a user error, so that a better error message can be provided
> next time.
>
>
>
> On Fri, Feb 22, 2013 at 7:46 PM, Glen Jenness <glenjenness at gmail.com>wrote:
>
>> For .xyz files you have numerous options!
>>
>> ase-gui (ag)
>> Avagodro
>> VMD
>> VESTA
>> XCrysDen
>>
>> Just to name a few :)
>>
>> All of the above are free and with the exception of ag all have versions
>> for windows and linux.
>>
>>
>> On Fri, Feb 22, 2013 at 11:32 AM, Ibrahim (Ibrahim Awad) Awad <
>> ieawad at crimson.ua.edu> wrote:
>>
>>> If i have .xyz files and I want to visualize them, how can I do that?
>>>
>>>
>>> On Fri, Feb 22, 2013 at 10:31 AM, Marcin Dulak <
>>> Marcin.Dulak at fysik.dtu.dk> wrote:
>>>
>>>>  Hi,
>>>>
>>>>
>>>> On 02/22/13 02:37, Ibrahim (Ibrahim Awad) Awad wrote:
>>>>
>>>> I'm new to Python and I've downloaded Ubunto and set up ASE. My target
>>>> is download CNT inside Copper. I don't know how to start. Any help please?
>>>>
>>>> please check if ASE provides an interface to a suitable code on
>>>> https://wiki.fysik.dtu.dk/ase/
>>>> then follow a couple of ASE Tutorials:
>>>> https://wiki.fysik.dtu.dk/ase/python.html
>>>> https://wiki.fysik.dtu.dk/ase/tutorials/surface.html
>>>> and continue with:
>>>> https://wiki.fysik.dtu.dk/ase/ase/structure.html#nanotubes
>>>>
>>>> Best regards,
>>>>
>>>> Marcin
>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> ase-users mailing listase-users at listserv.fysik.dtu.dkhttps://listserv.fysik.dtu.dk/mailman/listinfo/ase-users
>>>>
>>>>
>>>>
>>>>
>>>
>>> _______________________________________________
>>> ase-users mailing list
>>> ase-users at listserv.fysik.dtu.dk
>>> https://listserv.fysik.dtu.dk/mailman/listinfo/ase-users
>>>
>>
>>
>>
>> --
>> Dr. Glen Jenness
>> Schmidt Group/Morgan Group
>> Department of Chemistry/Materials Science and Engineering (MSAE)
>> University of Wisconsin - Madison
>>
>> _______________________________________________
>> ase-users mailing list
>> ase-users at listserv.fysik.dtu.dk
>> https://listserv.fysik.dtu.dk/mailman/listinfo/ase-users
>>
>
>


-- 
Dr. Glen Jenness
Schmidt Group/Morgan Group
Department of Chemistry/Materials Science and Engineering (MSAE)
University of Wisconsin - Madison
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