[ase-users] Pulling out data from NEB
Jesper Toft Rasmussen
jestr at nanotech.dtu.dk
Wed Jan 2 14:29:04 CET 2013
Dear all ASE users,
I have set up a system, where I want to perform nudged elastic band calculations using the ASE interface. After having created the initial/final images and interpolating, I come to the task of analyzing the data.
By using the ASE GUI, I have tested the NEB tool, but since I need to further fiddle with the data, I need some way of extracting these data sets. One way is to use the fit/fit0 routines (found from the source code). However, when I do this I clearly don't get the same result as the GUI provides. I have added images as proof. It is clear that the tangents are completely off.
Can anyone tell me why this is the case? And what I should do to get out the correct data?
Best regards,
Jesper Toft Rasmussen
PhD student
DTU Nanotech
Technical University of Denmark
[cid:image001.gif at 01CDE8F5.16FDB650]
Department of Micro- and Nanotechnology
Ørsteds Plads
Building 344
DK - 2800 Kgs. Lyngby
Denmark
Direct +45 45255694
jestr at nanotech.dtu.dk<mailto:jestr at nanotech.dtu.dk>
www.nanotech.dtu.dk<http://www.nanotech.dtu.dk/>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://listserv.fysik.dtu.dk/pipermail/ase-users/attachments/20130102/fef245aa/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: image001.gif
Type: image/gif
Size: 1055 bytes
Desc: image001.gif
URL: <http://listserv.fysik.dtu.dk/pipermail/ase-users/attachments/20130102/fef245aa/attachment.gif>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: neb_ase.png
Type: image/png
Size: 22620 bytes
Desc: neb_ase.png
URL: <http://listserv.fysik.dtu.dk/pipermail/ase-users/attachments/20130102/fef245aa/attachment.png>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: neb_matlab.png
Type: image/png
Size: 11086 bytes
Desc: neb_matlab.png
URL: <http://listserv.fysik.dtu.dk/pipermail/ase-users/attachments/20130102/fef245aa/attachment-0001.png>
More information about the ase-users
mailing list