[ase-users] [gpaw-users] ASE installation for windows
Marcin Dulak
Marcin.Dulak at fysik.dtu.dk
Fri Nov 7 09:35:43 CET 2014
On 11/06/2014 03:35 PM, Zahid Hasan wrote:
> If I save the result file in .pdb format with the commands
>
> dyn = QuasiNewton(slab, trajectory='N2Cu.pdb')
QuasiNewton trajectory keyword saves a file in trajectory format, no
matter how you name it.
You can convert the trajectory file into an xyz (or pdb) with:
ase-gui -o N2Cu.pdb N2Cu.traj
Note that you miss some information contained in the traj files when doing
the conversion to xyz/pdb (cell, local magnetic moments, constraints, ...)
Therefore it's better to work with trajectory files and visualize them
with ase-gui.
>
> is it possible to open the file and see the results in VMD?
yes.
Best regards,
Marcin
>
>
> On Thu, Nov 6, 2014 at 1:54 PM, Marcin Dulak
> <Marcin.Dulak at fysik.dtu.dk <mailto:Marcin.Dulak at fysik.dtu.dk>> wrote:
>
> On 11/06/2014 01:17 PM, Zahid Hasan wrote:
>> Dear all,
>> Do I need to install Povray seperately to generate image? Is this
>> the software provided in the website http://www.povray.org/download/
> yes, but povray won't work directly with ASE on windows due to
> Linux oriented os.system calls in
> https://trac.fysik.dtu.dk/projects/ase/browser/trunk/ase/io/pov.py
> (povray ... > /dev/null, etc.).
> Instead you can create the pov/ini povray files with an ASE python
> script and then open the pov file with povray.
>
> Another problem you may encounter is when using ase.lattice module.
> For some reasons the
> https://trac.fysik.dtu.dk/projects/ase/browser/trunk/ase/lattice/spacegroup/spacegroup.dat
> is not copied
> during the msi installation of ASE to
> C:\Python27\LIb\site-packages\ase\lattice\spacegroup.
> You need to download this file manually.
>
> Best regards,
>
> Marcin
>>
>> Thanks,
>> Zahid
>>
>> On Tue, Nov 4, 2014 at 11:52 AM, Zahid Hasan
>> <missionpagla at gmail.com <mailto:missionpagla at gmail.com>> wrote:
>>
>> I will request to just upload seperate windows msi
>> installers, which are compatible with each other and updated.
>>
>> On Tue, Nov 4, 2014 at 11:48 AM, Zahid Hasan
>> <missionpagla at gmail.com <mailto:missionpagla at gmail.com>> wrote:
>>
>> I have deinstalled the ASE and installed the GPAW
>> installer with ASE inside. But unfortunately the test
>> scripts do not work. It works only when the seperate ASE
>> installation is existing. Even after the GPAW test run it
>> shows runtime error, although it delivers some results!!
>>
>> On Tue, Nov 4, 2014 at 11:35 AM, Marcin Dulak
>> <Marcin.Dulak at fysik.dtu.dk
>> <mailto:Marcin.Dulak at fysik.dtu.dk>> wrote:
>>
>> Hi,
>>
>> yes, GPAW installer includes ASE.
>>
>> Best regards,
>>
>> Marcin
>>
>>
>> On 11/04/2014 10:59 AM, Zahid Hasan wrote:
>>
>> The installer includes also the latest ASE
>>
>>
>>
>>
>>
>>
>>
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>
>
>
>
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