[ase-users] dumbell creation

Darío Fdez-Pello Lois pello.lois at gmail.com
Thu Mar 12 23:21:52 CET 2015


Dear all,

Does anybody know how to create a dumbell from a given structure?
I've tried this but without fortune:

[..]
li = BodyCenteredCubic(size=(N,N,N),symbol='Li',latticeconstant=a0)
li[5].position -= 1/2*d*u
new_pos = li[5].position + d*u
li.append(Atom('Li',(new_pos[0],new_pos[1],new_pos[2])))
li.calc = GPAW(mode=PW(ecut), xc='PBE', kpts={'size':
(k/N,k/N,k/N),'gamma': True}, usesymm=None)
dyn = FIRE(li,trajectory='d001.traj')
dyn.run(fmax=0.05)
mo.calc.write('d001.gpw')

Thanks in advance!!
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://listserv.fysik.dtu.dk/pipermail/ase-users/attachments/20150312/7f92834b/attachment.html>


More information about the ase-users mailing list