[gpaw-users] error in geometry optimization of Cu(211)
Brian Knudsen
brian_88_knudsen at hotmail.com
Mon Apr 4 16:32:59 CEST 2011
I’m trying to perform a geometry optimization of the Cu (211) surface with GPAW.
The first five geometry steps converge without any problems, but on the sixth , just after the first SCF cycle i get an asertion error:
Number of Valence Electrons: 297
log10-error: Total Iterations:
Time WFS Density Energy Fermi Poisson
iter: 1 22:20:58 -1.2 -84.00705 10 47
Traceback (most recent call last):
File "Cu211.py", line 42, in ?
relax.run(fmax=0.03)
File "/xbar/nas2/home2/s02/ashj/summerschool-env/ase/ase/optimize/optimize.py", line 114, in run
f = self.atoms.get_forces()
File "/xbar/nas2/home2/s02/ashj/summerschool-env/ase/ase/atoms.py", line 536, in get_forces
forces = self.calc.get_forces(self)
File "/xbar/nas2/home2/s02/ashj/summerschool-env/gpaw-0.7.2/gpaw/aseinterface.py", line 61, in get_
forces
force_call_to_set_positions=force_call_to_set_positions)
File "/xbar/nas2/home2/s02/ashj/summerschool-env/gpaw-0.7.2/gpaw/paw.py", line 265, in calculate
self.occupations):
File "/xbar/nas2/home2/s02/ashj/summerschool-env/gpaw/gpaw/scf.py", line 59, in run
density.update(wfs)
File "/xbar/nas2/home2/s02/ashj/summerschool-env/gpaw/gpaw/density.py", line 164, in update
wfs.calculate_atomic_density_matrices(self.D_asp)
File "/xbar/nas2/home2/s02/ashj/summerschool-env/gpaw/gpaw/wavefunctions/base.py", line 188, in cal
culate_atomic_density_matrices
self.calculate_atomic_density_matrices_with_occupation(D_asp, f_un)
File "/xbar/nas2/home2/s02/ashj/summerschool-env/gpaw/gpaw/wavefunctions/base.py", line 200, in cal
culate_atomic_density_matrices_with_occupation
D_sp[:] = [pack(D_ii) for D_ii in D_sii]
File "/xbar/nas2/home2/s02/ashj/summerschool-env/gpaw-0.7.2/gpaw/utilities/__init__.py", line 217,
in pack
assert error < tolerance, 'Pack not symmetric by %s' % error + ' %'
AssertionError: Pack not symmetric by nan %
GPAW CLEANUP (node 15): exceptions.AssertionError occurred. Calling MPI_Abort!
Could you please help my with a reason for this error, and possibly what i should do to get rid of it
Best regards
Brian
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