[gpaw-users] The error ZipExtFile when running gapw

[anyy zsj]

All is OK now!
Thank you very much!

2014-08-27 21:41 GMT+08:00 Marcin Dulak <Marcin.Dulak at fysik.dtu.dk>:
> Hi,
>
>
> On 08/27/2014 03:35 PM, anyy zsj wrote:
>>
>> Thank you!
>> After check my PYTHONPATH I found there is a directory "io" in my
>> PYTHONPATH located at:
>> .../python-ase-3.6.0.2515/ase
>
> PYTHONPATH must not contain: ...pathtodir.../python-ase-3.6.0.2515/ase
> only: ...pathtodir.../python-ase-3.6.0.2515
> ASE 3.6.0 is very old - consider updating.
>
> Best regards,
>
> Marcin
>
>> The error remains whereever I issued the "gpaw-test" command. So any
>> more suggestions?
>>
>> 2014-08-27 18:06 GMT+08:00 Marcin Dulak <Marcin.Dulak at fysik.dtu.dk>:
>>>
>>> Hi,
>>>
>>>
>>> On 08/27/2014 11:01 AM, anyy wrote:
>>>>
>>>> Dear all:
>>>> After installation of gpaw, I start to test the code but with the
>>>> following error. After google a lot I realize that the problem may be
>>>> originated from python 2.7. But how to fix it? I have no idea and Could
>>>> you give me some suggestions? Thank you!
>>>>
>>>>
>>>>
>>>> Traceback (most recent call last):
>>>> File "./spinpol.py", line 2, in <module>
>>>> from gpaw import GPAW
>>>> File
>>>>
>>>>
>>>> "/home/zhao/GPAW/source/gpaw-0.9.0.8965/build/lib.linux-x86_64-2.7/gpaw/__init__.py",
>>>> line 211, in <module>
>>>> from gpaw.aseinterface import GPAW
>>>> File
>>>>
>>>>
>>>> "/home/zhao/GPAW/source/gpaw-0.9.0.8965/build/lib.linux-x86_64-2.7/gpaw/aseinterface.py",
>>>> line 12, in <module>
>>>> from gpaw.paw import PAW
>>>> File
>>>>
>>>>
>>>> "/home/zhao/GPAW/source/gpaw-0.9.0.8965/build/lib.linux-x86_64-2.7/gpaw/paw.py",
>>>> line 36, in <module>
>>>> from gpaw.setup import Setups
>>>> File
>>>>
>>>>
>>>> "/home/zhao/GPAW/source/gpaw-0.9.0.8965/build/lib.linux-x86_64-2.7/gpaw/setup.py",
>>>> line 21, in <module>
>>>> from gpaw.setup_data import SetupData
>>>> File
>>>>
>>>>
>>>> "/home/zhao/GPAW/source/gpaw-0.9.0.8965/build/lib.linux-x86_64-2.7/gpaw/setup_data.py",
>>>> line 22, in <module>
>>>> import gzip
>>>> File "/usr/lib/python2.7/gzip.py", line 10, in <module>
>>>> import io
>>>> File "/home/zhao/GPAW/install/python-ase-3.6.0.2515/ase/io/__init__.py",
>>>> line 4, in <module>
>>>> from zipfile import is_zipfile
>>>> File "/usr/lib/python2.7/zipfile.py", line 464, in <module>
>>>> class ZipExtFile(io.BufferedIOBase):
>>>> AttributeError: 'module' object has no attribute 'BufferedIOBase'
>>>> GPAW CLEANUP for serial binary: <type 'exceptions.AttributeError'>
>>>> occured. Calling sys.exit()
>>>
>>> do you have an io.py file in your PYTHONPATH or current directory?
>>> Please do not run any tests from within gpaw or ase source.
>>>
>>> Best regards,
>>>
>>> Marcin
>>>>
>>>>
>>>>
>>>>
>>>> Shijun Zhao
>>>> Peking University
>>>> _______________________________________________
>>>> gpaw-users mailing list
>>>> gpaw-users at listserv.fysik.dtu.dk
>>>> https://listserv.fysik.dtu.dk/mailman/listinfo/gpaw-users
>>>>
>>>>
>>>
>>
>
>
> --
> ***********************************
>  Marcin Dulak
> Technical University of Denmark
> Department of Physics
> Building 307, Room 229
> DK-2800 Kongens Lyngby
> Denmark
> Tel.: (+45) 4525 3157
> Fax.: (+45) 4593 2399
> email: Marcin.Dulak at fysik.dtu.dk
>
> ***********************************
>