[gpaw-users] Problems calculating absorption spectrum
Simon Lamowski
simon.lamowski at uni-konstanz.de
Thu Jul 10 15:19:18 CEST 2014
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Hello all!
I have problems calculating an absorption spectrum with TDDFT within
an jellium modell. After propagating the density in real time, I
wanted to calculate absorption spectrum from the dipole-moment-file.
The largest error message I got was:
> Using kick strength = [ 0. 0. 0.001] . Traceback (most
> recent call last): File "tip_cyl_x_0.0000000_specrestart.py", line
> 91, in <module>
> photoabsorption_spectrum('/home/newton/lamowski/calc/assymmetric
> /tddft/cyl-tip/tip_cyl_x_{:.7f}_dm.dat'.format(x), '/home/newton
> /lamowski/calc/assymmetric/tddft/cyl-tip
> /tip_cyl_x_{:.7f}_spectrum_z.dat'.format(x)) File
> "/software/packages/gpaw/0.10.0.11364-intel-openblas-impi/lib
> /python2.7/site-packages/gpaw/tddft/__init__.py", line 601, in
> photoabsorption_spectrum alphaz = np.sum(np.sin(t*w) *
> np.exp(-t**2*sigma**2/2.0) * dm[:,2]) KeyboardInterrupt GPAW
> CLEANUP (node 0): <type 'exceptions.KeyboardInterrupt'> occurred.
> Calling MPI_Abort! application called MPI_Abort(MPI_COMM_WORLD, 42)
> - process 0
The problem is that I did not interrupt the job. I also had my
administrator looking for reasons for this behavior. But he did not
find any hints in the log-files.
So I wonder if there could be a problem in tddft/__init__.py or if
there is something wrong with the dipole moments. Since I am
calculating a jellium model and the positive background seems not to
be included in the charge density needed to get that dipole moments.
Can anybody please give me some hints what I can check (and change) to
understand (and prevent) this behavior.
If you need more information, please let me know.
Thank you.
- --
Simon Lamowski
PhD student
AG Pauly
University of Konstanz
Department of Physics
Universitätsstraße 10
Room P1045
D-78464 Konstanz
Germany
email: simon.lamowski at uni-konstanz.de
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.19 (GNU/Linux)
Comment: Using GnuPG with Thunderbird - http://www.enigmail.net/
iQEcBAEBAgAGBQJTvpLWAAoJEO/4NVxqOc3Rc5IH/Ap3TrBrcW04SVl4ik2RSAsw
PCzFB1WvuG3oduTv9poCRzJNAOZVQ49LCrHQp7T6BZjgb2WnYdHb3mXurFFkHjZN
o28/zKa/+beepeifI9wTSf7fyAmVdeAdeQjebuByLTnbksT/dJN1jHsycbGVNDp7
yWY4EOjVPGBpOatwrgLmV7lRnR3deqwGUc6HhSlH8OO21F1L44GG/kWZwvUjMN2N
R8FC5fH/ADwZpZ62XTfYZBfhqlEMFjKqWpB4ZCasuIQH/b5IAWKLBe7oFPx/EsUI
vuOI/Xv8ujeia2ZPXxl3aq0zCMjR3RAZ9VvFgqrQ6TNojSqOxiXl9kvsYyS9uGA=
=iDxz
-----END PGP SIGNATURE-----
-------------- next part --------------
A non-text attachment was scrubbed...
Name: tip_cyl_x_0.0000000_specrestart.py
Type: text/x-python
Size: 3738 bytes
Desc: not available
URL: <http://listserv.fysik.dtu.dk/pipermail/gpaw-users/attachments/20140710/2799eb92/attachment.py>
More information about the gpaw-users
mailing list