[gpaw-users] ImportError: _gpaw.so: undefined symbol: zgttrf_

[Ask Hjorth Larsen]

Hello

Looks like it "knows" the library directories at compile time and
"forgets" them at runtime.  I would use -Wl,rpath=<directory> which
will "remember" it.

Example with rpath:
http://dcwww.camd.dtu.dk/~askhl/files/customize-jormungandr.py

Best regards
Ask

2016-03-31 3:24 GMT+02:00 Khorshidi, Alireza <alireza_khorshidi at brown.edu>:
> Hello all,
>
> I am trying to install GPAW on my personal machine with Ubuntu OS. After
> fixing several issues, I finally encountered the following error which I
> cannot think of where it is originating from.
>
> I was wondering if anyone else have seen similar error before? I truly
> appreciate any help.
>
> Python 2.7.6 (default, Jun 22 2015, 18:00:18)
> [GCC 4.8.2] on linux2
> Type "help", "copyright", "credits" or "license" for more information.
>>>> import gpaw
> Traceback (most recent call last):
>   File "<stdin>", line 1, in <module>
>   File "/home/alireza/gpaw/gpaw/__init__.py", line 232, in <module>
>     from gpaw.aseinterface import GPAW
>   File "/home/alireza/gpaw/gpaw/aseinterface.py", line 8, in <module>
>     from gpaw.external import PointChargePotential
>   File "/home/alireza/gpaw/gpaw/external.py", line 6, in <module>
>     import _gpaw
> ImportError: /home/alireza/gpaw/gpaw/../build/lib.linux-i686-2.7/_gpaw.so:
> undefined symbol: zgttrf_
>
> Regards,
> Alireza
>
>
> --
> Alireza Khorshidi
> PhD Candidate
> Brown University School of Engineering
> 184 Hope Street
> Providence, RI 02912
>
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