[gpaw-users] python2.7 gpaw-1.4.0 test Errors/results
Jens Jørgen Mortensen
jjmo at dtu.dk
Mon Jan 14 12:45:53 CET 2019
On 1/14/19 12:11 PM, Alva Dillon wrote:
> I got a lot of test errors. Although the build was successful without
> any errors.
>
> (py36) [alvadillon at compute-1-21 gpaw-1.5.0]$ gpaw test -j 4
>
> python-3.6.8 /home/alvadillon/builds/miniconda2/envs/py36/bin/python
>
> gpaw-1.5.0 /home/alvadillon/builds/gpaw-1.5.0/gpaw/
>
> ase-3.17.0
> /home/alvadillon/.local/lib/python3.6/site-packages/ase-3.17.0-py3.6.egg/ase/
>
> numpy-1.14.3
> /home/gieseking-lab/intel/intelpython3/lib/python3.6/site-packages/numpy/
>
> scipy-1.1.0
> /home/gieseking-lab/intel/intelpython3/lib/python3.6/site-packages/scipy/
>
> _gpaw
> /home/alvadillon/.local/lib/python3.6/site-packages/_gpaw.cpython-36m-x86_64-linux-gnu.so
> <http://gpaw.cpython-36m-x86_64-linux-gnu.so>
>
> parallel /home/alvadillon/builds/miniconda2/envs/py36/bin/gpaw-python
>
> MPI enabled no
>
> scalapack no (MPI unavailable)
>
> Elpa no (MPI unavailable)
>
> FFTW yes
>
> libvdwxc no
>
> PAW-datasets 1: /home/alvadillon/builds/gpaw-setups-0.9.20000
>
> 2: /usr/local/share/gpaw-setups
>
> 3: /usr/share/gpaw-setups
>
> Running tests in /tmp/gpaw-test-hsb1io7n
>
> Jobs: 4, Cores: 1, debug-mode: False
>
> =============================================================================
>
> linalg/gemm_complex.py 0.026 OK
>
>
...
> pw/reallfc.py 0.100 FAILED!
>
> #############################################################################
>
> Traceback (most recent call last):
>
> File "/home/alvadillon/builds/gpaw-1.5.0/gpaw/test/__init__.py",
> line 664, in run_one
>
> exec(compile(fd.read(), filename, 'exec'), loc)
>
> File "/home/alvadillon/builds/gpaw-1.5.0/gpaw/test/pw/reallfc.py",
> line 42, in <module>
>
> lfc.add(b, c_axi)
>
> File "/home/alvadillon/builds/gpaw-1.5.0/gpaw/wavefunctions/pw.py",
> line 1567, in add
>
> f_GI = self.expand(q, G1, G2, cc=False)
>
> File "/home/alvadillon/builds/gpaw-1.5.0/gpaw/wavefunctions/pw.py",
> line 1509, in expand
>
> cc, f_GI)
>
> TypeError: function takes exactly 9 arguments (8 given)
>
It looks like your new version 1.5 Python code is picking up the old
C-code extension module (_gpaw.so). You are getting it from:
/home/alvadillon/.local/lib/python3.6/site-packages/_gpaw.cpython-36m-x86_64-linux-gnu.so
<http://gpaw.cpython-36m-x86_64-linux-gnu.so>
But it must be some left-over from an earlier build of GPAW.
Jens Jørgen
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