[gpaw-users] Hubbard U parameter

Punit Kumar ip.punit.2016 at gmail.com
Mon Sep 30 15:24:05 CEST 2024


Hello Jens,

Thank you for your reply. The full trace back error message is mentioned
below:

rank=07 L00: Traceback (most recent call last):
rank=07 L01:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/__init__.py",
line 216, in main
rank=07 L02:     runpy.run_path(gpaw_args.script, run_name='__main__')
rank=07 L03:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 265,
in run_path
rank=07 L04:     return _run_module_code(code, init_globals, run_name,
rank=07 L05:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 97,
in _run_module_code
rank=07 L06:     _run_code(code, mod_globals, init_globals,
rank=07 L07:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 87,
in _run_code
rank=07 L08:     exec(code, run_globals)
rank=08 L00: Traceback (most recent call last):
rank=07 L09:   File "ucf.py", line 36, in <module>
rank=07 L10:     opt.run(fmax=0.05)
rank=08 L01:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/__init__.py",
line 216, in main
rank=07 L11:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 275, in run
rank=08 L02:     runpy.run_path(gpaw_args.script, run_name='__main__')
rank=07 L12:     return Dynamics.run(self)
rank=08 L03:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 265,
in run_path
rank=07 L13:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 162, in run
rank=08 L04:     return _run_module_code(code, init_globals, run_name,
rank=07 L14:     for converged in Dynamics.irun(self):
rank=08 L05:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 97,
in _run_module_code
rank=07 L15:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 128, in irun
rank=07 L16:     self.atoms.get_forces()
rank=07 L17:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/atoms.py",
line 791, in get_forces
rank=08 L06:     _run_code(code, mod_globals, init_globals,
rank=07 L18:     forces = self._calc.get_forces(self)
rank=06 L00: Traceback (most recent call last):
rank=08 L07:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 87,
in _run_code
rank=07 L19:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/abc.py",
line 23, in get_forces
rank=06 L01:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/__init__.py",
line 216, in main
rank=08 L08:     exec(code, run_globals)
rank=07 L20:     return self.get_property('forces', atoms)
rank=06 L02:     runpy.run_path(gpaw_args.script, run_name='__main__')
rank=08 L09:   File "ucf.py", line 36, in <module>
rank=07 L21:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/calculator.py",
line 736, in get_property
rank=06 L03:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 265,
in run_path
rank=08 L10:     opt.run(fmax=0.05)
rank=07 L22:     self.calculate(atoms, [name], system_changes)
rank=06 L04:     return _run_module_code(code, init_globals, run_name,
rank=08 L11:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 275, in run
rank=07 L23:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 322, in calculate
rank=06 L05:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 97,
in _run_module_code
rank=08 L12:     return Dynamics.run(self)
rank=06 L06:     _run_code(code, mod_globals, init_globals,
rank=07 L24:     for _ in self.icalculate(atoms, properties,
system_changes):
rank=08 L13:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 162, in run
rank=06 L07:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 87,
in _run_code
rank=07 L25:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 345, in icalculate
rank=08 L14:     for converged in Dynamics.irun(self):
rank=06 L08:     exec(code, run_globals)
rank=07 L26:     self.set_positions(atoms)
rank=08 L15:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 128, in irun
rank=06 L09:   File "ucf.py", line 36, in <module>
rank=07 L27:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 545, in set_positions
rank=08 L16:     self.atoms.get_forces()
rank=06 L10:     opt.run(fmax=0.05)
rank=07 L28:     nlcao, nrand = self.wfs.initialize(self.density,
self.hamiltonian,
rank=08 L17:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/atoms.py",
line 791, in get_forces
rank=06 L11:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 275, in run
rank=07 L29:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/wavefunctions/fdpw.py",
line 307, in initialize
rank=08 L18:     forces = self._calc.get_forces(self)
rank=06 L12:     return Dynamics.run(self)
rank=07 L30:     hamiltonian.update(density)
rank=08 L19:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/abc.py",
line 23, in get_forces
rank=06 L13:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 162, in run
rank=07 L31:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 232, in update
rank=08 L20:     return self.get_property('forces', atoms)
rank=06 L14:     for converged in Dynamics.irun(self):
rank=07 L32:     atomic_energies = self.update_corrections(density, W_aL)
rank=08 L21:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/calculator.py",
line 736, in get_property
rank=06 L15:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 128, in irun
rank=07 L33:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 290, in update_corrections
rank=08 L22:     self.calculate(atoms, [name], system_changes)
rank=06 L16:     self.atoms.get_forces()
rank=07 L34:     eU, dHU_sp = hubbard(setup, D_sp)
rank=08 L23:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 322, in calculate
rank=06 L17:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/atoms.py",
line 791, in get_forces
rank=07 L35:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hubbard.py",
line 13, in hubbard
rank=08 L24:     for _ in self.icalculate(atoms, properties,
system_changes):
rank=06 L18:     forces = self._calc.get_forces(self)
rank=07 L36:     nn = (2 * np.array(l_j) + 1)[0:nl[0]].sum()
rank=08 L25:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 345, in icalculate
rank=07 L37: IndexError: index 0 is out of bounds for axis 0 with size 0
rank=06 L19:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/abc.py",
line 23, in get_forces
rank=08 L26:     self.set_positions(atoms)
rank=06 L20:     return self.get_property('forces', atoms)
rank=08 L27:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 545, in set_positions
rank=06 L21:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/calculator.py",
line 736, in get_property
rank=08 L28:     nlcao, nrand = self.wfs.initialize(self.density,
self.hamiltonian,
rank=06 L22:     self.calculate(atoms, [name], system_changes)
rank=08 L29:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/wavefunctions/fdpw.py",
line 307, in initialize
rank=06 L23:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 322, in calculate
rank=08 L30:     hamiltonian.update(density)
rank=06 L24:     for _ in self.icalculate(atoms, properties,
system_changes):
rank=08 L31:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 232, in update
rank=06 L25:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 345, in icalculate
rank=08 L32:     atomic_energies = self.update_corrections(density, W_aL)
rank=06 L26:     self.set_positions(atoms)
GPAW CLEANUP (node 7): <class 'IndexError'> occurred.  Calling MPI_Abort!
rank=08 L33:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 290, in update_corrections
rank=06 L27:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 545, in set_positions
rank=08 L34:     eU, dHU_sp = hubbard(setup, D_sp)
rank=06 L28:     nlcao, nrand = self.wfs.initialize(self.density,
self.hamiltonian,
rank=08 L35:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hubbard.py",
line 13, in hubbard
rank=06 L29:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/wavefunctions/fdpw.py",
line 307, in initialize
rank=08 L36:     nn = (2 * np.array(l_j) + 1)[0:nl[0]].sum()
rank=06 L30:     hamiltonian.update(density)
rank=08 L37: IndexError: index 0 is out of bounds for axis 0 with size 0
rank=06 L31:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 232, in update
rank=06 L32:     atomic_energies = self.update_corrections(density, W_aL)
rank=06 L33:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 290, in update_corrections
rank=06 L34:     eU, dHU_sp = hubbard(setup, D_sp)
rank=06 L35:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hubbard.py",
line 13, in hubbard
rank=06 L36:     nn = (2 * np.array(l_j) + 1)[0:nl[0]].sum()
rank=06 L37: IndexError: index 0 is out of bounds for axis 0 with size 0
GPAW CLEANUP (node 8): <class 'IndexError'> occurred.  Calling MPI_Abort!
GPAW CLEANUP (node 6): <class 'IndexError'> occurred.  Calling MPI_Abort!
rank=09 L00: Traceback (most recent call last):
rank=09 L01:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/__init__.py",
line 216, in main
rank=09 L02:     runpy.run_path(gpaw_args.script, run_name='__main__')
rank=09 L03:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 265,
in run_path
rank=09 L04:     return _run_module_code(code, init_globals, run_name,
rank=09 L05:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 97,
in _run_module_code
rank=09 L06:     _run_code(code, mod_globals, init_globals,
rank=09 L07:   File "/opt/python/3.8.5.0/lib/python3.8/runpy.py", line 87,
in _run_code
rank=09 L08:     exec(code, run_globals)
rank=09 L09:   File "ucf.py", line 36, in <module>
rank=09 L10:     opt.run(fmax=0.05)
rank=09 L11:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 275, in run
rank=09 L12:     return Dynamics.run(self)
rank=09 L13:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 162, in run
rank=09 L14:     for converged in Dynamics.irun(self):
rank=09 L15:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py",
line 128, in irun
rank=09 L16:     self.atoms.get_forces()
rank=09 L17:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/atoms.py",
line 791, in get_forces
rank=09 L18:     forces = self._calc.get_forces(self)
rank=09 L19:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/abc.py",
line 23, in get_forces
rank=09 L20:     return self.get_property('forces', atoms)
rank=09 L21:   File
"/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/site-packages/ase-3.21.0b1-py3.8.egg/ase/calculators/calculator.py",
line 736, in get_property
rank=09 L22:     self.calculate(atoms, [name], system_changes)
rank=09 L23:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 322, in calculate
rank=09 L24:     for _ in self.icalculate(atoms, properties,
system_changes):
rank=09 L25:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 345, in icalculate
rank=09 L26:     self.set_positions(atoms)
rank=09 L27:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/calculator.py",
line 545, in set_positions
rank=09 L28:     nlcao, nrand = self.wfs.initialize(self.density,
self.hamiltonian,
rank=09 L29:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/wavefunctions/fdpw.py",
line 307, in initialize
rank=09 L30:     hamiltonian.update(density)
rank=09 L31:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 232, in update
rank=09 L32:     atomic_energies = self.update_corrections(density, W_aL)
rank=09 L33:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hamiltonian.py",
line 290, in update_corrections
rank=09 L34:     eU, dHU_sp = hubbard(setup, D_sp)
rank=09 L35:   File
"/scratch/apps/gpaw/20.1/gcc/8.3.0/lib/python3.8/site-packages/gpaw/hubbard.py",
line 13, in hubbard
rank=09 L36:     nn = (2 * np.array(l_j) + 1)[0:nl[0]].sum()
rank=09 L37: IndexError: index 0 is out of bounds for axis 0 with size 0
GPAW CLEANUP (node 9): <class 'IndexError'> occurred.  Calling MPI_Abort!
Rank 7 [Mon Sep 30 18:25:22 2024] [c1-0c0s14n0] application called
MPI_Abort(MPI_COMM_WORLD, 42) - process 7
Rank 8 [Mon Sep 30 18:25:22 2024] [c1-0c0s14n0] application called
MPI_Abort(MPI_COMM_WORLD, 42) - process 8
Rank 6 [Mon Sep 30 18:25:22 2024] [c1-0c0s14n0] application called
MPI_Abort(MPI_COMM_WORLD, 42) - process 6
Rank 9 [Mon Sep 30 18:25:22 2024] [c1-0c0s14n0] application called
MPI_Abort(MPI_COMM_WORLD, 42) - process 9
_pmiu_daemon(SIGCHLD): [NID 00248] [c1-0c0s14n0] [Mon Sep 30 18:25:22 2024]
PE RANK 8 exit signal Aborted
[NID 00248] 2024-09-30 18:25:22 Apid 24728226: initiated application
termination
Application 24728226 exit codes: 134
Application 24728226 resources: utime ~6s, stime ~2s, Rss ~218192, inblocks
~734, outblocks ~0

I want to emphasize that the paw setup I'm using for La was downloaded from
an older version of tar files available at the GPAW site. In my output
file, I noticed that the valence state of La doesn't include the f-orbital.
Here's the La setup from my output file.

La-setup:
  name: Lanthanum
  id: 9392f4749781b696b062ab610be201f0
  Z: 57.0
  valence: 11
  core: 46
  charge: 0.0
  Hubbard U: 3.400000 eV (l=3, scale=True)
  file: /home/fuelcells_batteries/14i170002/gpaw-setups-0.9.20000/La.PBE.gz
  compensation charges: gauss, rc=0.32, lmax=2
  cutoffs: 2.14(filt), 2.20(core),
  valence states:
                energy  radius
    5s(2.00)   -38.887   1.217
    6s(2.00)    -3.677   1.217
    5p(6.00)   -22.409   1.058
    5d(1.00)    -3.094   1.005
    *p           4.803   1.058
    *d          24.118   1.005

Is that the reason I am getting the error message? But why index error?

Best regards
Punit

On Mon, 30 Sept 2024 at 11:43, Jens Jørgen Mortensen <jjmo at dtu.dk> wrote:

> Can you show a bit more of the error message?  Perhaps everything from
> rank=11.
>
> Jens Jørgen
>
> Den 28.09.2024 kl. 15.44 skrev Punit Kumar via gpaw-users:
> > Dear users,
> >
> > I need assistance related to Hubbard U correction implementation in
> > GPAW. I want to include Hubbard U for the f-orbital of La and the d-
> > orbital of Fe for the LaFeO3 material. But, when I ran the calculation,
> > an index error occurred. A snapshot of the error is mentioned below:
> >
> >   GPAW CLEANUP (node 13): <class 'IndexError'> occurred.  Calling
> MPI_Abort!
> > rank=11 L09:   File "ucf.py", line 36, in <module>
> > rank=10 L39: IndexError: index 0 is out of bounds for axis 0 with size 0
> > rank=11 L10:     opt.run(fmax=0.1)
> > rank=11 L11:   File "/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/
> > site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py", line
> > 275, in run
> > GPAW CLEANUP (node 12): <class 'IndexError'> occurred.  Calling
> MPI_Abort!
> > rank=11 L12:     return Dynamics.run(self)
> > rank=11 L13:   File "/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/
> > site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py", line
> > 162, in run
> > rank=11 L14:     for converged in Dynamics.irun(self):
> > rank=11 L15:   File "/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/
> > site-packages/ase-3.21.0b1-py3.8.egg/ase/optimize/optimize.py", line
> > 128, in irun
> > rank=11 L16:     self.atoms.get_forces()
> > rank=11 L17:   File "/scratch/apps/ase/3.19.0/gcc/8.3.0/lib/python3.8/
> > site-packages/ase-3.21.0b1-py3.8.egg/ase/constraints.py", line 2420, in
> > get_forces
> > rank=11 L18:     stress = self.atoms.get_stress(**kwargs)
> >
> > I want to mention that when I remove the Hubbard correction for the La
> > f-orbital, the calculation runs without error. However, when I include
> > the La f-orbital, it gives me an index error. I have attached my input
> > file below, and my calculation setup is mentioned as follows:
> >
> > from ase.io <http://ase.io> import *
> > from ase.spacegroup import *
> > from ase.optimize import *
> > from ase.constraints import *
> > from gpaw import GPAW, PW, FermiDirac, MixerSum, Mixer
> > from ase.visualize import view
> >
> > # structure of lfo
> > lfo = read('initial.traj')
> >
> > calc = GPAW(mode=PW(450),
> >                        xc='PBE',
> >                        spinpol=True,
> >                        nbands='nao',
> >                        kpts={'size':(4,4,3),'gamma':True},
> >                        eigensolver='dav',
> >                        setups={'Fe': ':d,5.16', 'La': ':f,3.40'},
> >                        mixer=MixerSum(0.05, 5, 100),
> >                        maxiter=1000,
> >                        occupations=FermiDirac(0.1,fixmagmom=False),
> >                        symmetry={'point_group':False},
> >                        convergence={'energy': 1.0e-4, 'density': 1.0e-5},
> >                        txt='lfo.out')
> >
> > lfo.set_calculator(calc)
> > calc.attach(calc.write, 10, 'lfo.gpw', mode='all')
> >
> > ucf = UnitCellFilter(lfo, [True,True,True,True,True,True])
> > opt = BFGS(ucf, logfile='opt.log')
> > traj = Trajectory('lfo.traj', 'w', lfo)
> > opt.attach(traj)
> > opt.run(fmax=0.1)
> >
> > Can anyone help me resolve this issue?
> >
> > Best regards
> > Punit
> >
> >
> >
> >
> >
> > _______________________________________________
> > gpaw-users mailing list
> > gpaw-users at listserv.fysik.dtu.dk
> > https://listserv.fysik.dtu.dk/mailman/listinfo/gpaw-users
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://listserv.fysik.dtu.dk/pipermail/gpaw-users/attachments/20240930/23207855/attachment-0001.htm>


More information about the gpaw-users mailing list