[gpaw-users] compilation help

[Glen Jenness]

Those are still there.

The only thing that really changed where the IPO objects i.e. instead of:
"/tmp/ipo_iccjqCeKV.o: In function `overlap':"

I get

"/tmp/ipo_icc1xXXJ4.o: In function `overlap':"

I still have all the external declaration remarks that I had before.

I've attached my newer build.log



On Mon, Apr 22, 2013 at 10:09 AM, Marcin Dulak <Marcin.Dulak at fysik.dtu.dk>wrote:

>  On 04/22/2013 04:52 PM, Glen Jenness wrote:
>
> Marcin,
> Sadly no.  Still getting the same error.
>
> but the problems with "external declaration in primary source file" etc,
> disappeared?
> How the complete build log looks like now, starting from python setup.py
> clean?
>
> Marcin
>
>
>  Glen
>
>
> On Mon, Apr 22, 2013 at 9:43 AM, Marcin Dulak <Marcin.Dulak at fysik.dtu.dk>wrote:
>
>>  Hi,
>>
>> first, in the customize.py, try to use:
>>
>> include_dirs +=
>>
>> You are missing some includes.
>> Does that help?
>>
>> Marcin
>>
>>
>> On 04/20/2013 09:39 PM, Glen Jenness wrote:
>>
>>  Hey GPAW users!
>>
>>  I recently tried compiling GPAW, but I keep getting this error:
>>
>>  /usr/lib64/python2.4/config/libpython2.4.a(posixmodule.o): In function
>> `posix_tmpnam':
>> (.text+0x725): warning: the use of `tmpnam_r' is dangerous, better use
>> `mkstemp'
>> /usr/lib64/python2.4/config/libpython2.4.a(posixmodule.o): In function
>> `posix_tempnam':
>> (.text+0x808): warning: the use of `tempnam' is dangerous, better use
>> `mkstemp'
>> /tmp/ipo_iccjqCeKV.o: warning: memset used with constant zero length
>> parameter; this could be due to transposed parameters
>> /tmp/ipo_iccjqCeKV.o: In function `overlap':
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:92: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:92: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:92: undefined reference
>> to `__builtin___memcpy_chk'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:92: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:92: undefined reference
>> to `__builtin___memcpy_chk'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:138: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:138: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:138: undefined reference
>> to `__builtin___memcpy_chk'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:138: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:138: undefined reference
>> to `__builtin___memcpy_chk'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:146: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:146: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:146: undefined reference
>> to `__builtin___memcpy_chk'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:146: undefined reference
>> to `__builtin_object_size'
>> /home/gjenness/programs/gpaw-0.9.0.8965/c/lcao.c:146: undefined reference
>> to `__builtin___memcpy_chk'
>> /tmp/ipo_iccjqCeKV.o: In function `bmgs_cut':
>> /
>>
>>  It continues on (I'm including my full build.log file and
>> customize.py), but I can't figure out how to correct it.  I am using
>> python2.4
>>
>>  Any help would be appreciated :)
>>
>>  Thanks!
>> Glen
>>
>>  --
>> Dr. Glen Jenness
>> Schmidt Group/Morgan Group
>> Department of Chemistry/Materials Science and Engineering (MSAE)
>> University of Wisconsin - Madison
>>
>>
>>  _______________________________________________
>> gpaw-users mailing listgpaw-users at listserv.fysik.dtu.dkhttps://listserv.fysik.dtu.dk/mailman/listinfo/gpaw-users
>>
>>
>>
>> --
>> ***********************************
>>
>> Marcin Dulak
>> Technical University of Denmark
>> Department of Physics
>> Building 307, Room 229
>> DK-2800 Kongens Lyngby
>> Denmark
>> Tel.: (+45) 4525 3157
>> Fax.: (+45) 4593 2399
>> email: Marcin.Dulak at fysik.dtu.dk
>>
>> ***********************************
>>
>>
>
>
>  --
> Dr. Glen Jenness
> Schmidt Group/Morgan Group
> Department of Chemistry/Materials Science and Engineering (MSAE)
> University of Wisconsin - Madison
>
>
>
> --
> ***********************************
>
> Marcin Dulak
> Technical University of Denmark
> Department of Physics
> Building 307, Room 229
> DK-2800 Kongens Lyngby
> Denmark
> Tel.: (+45) 4525 3157
> Fax.: (+45) 4593 2399
> email: Marcin.Dulak at fysik.dtu.dk
>
> ***********************************
>
>


-- 
Dr. Glen Jenness
Schmidt Group/Morgan Group
Department of Chemistry/Materials Science and Engineering (MSAE)
University of Wisconsin - Madison
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